Your English writing platform
Discover LudwigExact(1)
A binding instance was defined if the matching score between its oligonucleotide sequence and the PSSM of the transcription factor binding sites is higher than a PSSM-specific cutoff, which was determined by the lowest matching score where the density of positively identified binding sites in the ChIP-enriched regions is 5 times more than the one in the background sequences (or FDR of ≤20%).
Similar(59)
The nearest neighbors of an instance are defined by the Euclidean distance [ 4].
Nonspecific binding was defined as binding in the presence of 100 µM phentolamine hydrochloride.
Specific binding was defined as total minus nonspecific binding.
Non-specific binding was defined by 1 µM NTX.
For instance, comorbidity was defined differently in the two studies.
In both instances, significance was defined as p < 0.05.
Then, a CTCF binding site in the peak region was defined as the motif instance locus having a FIMO E-value < 0.01.
Some of the negative controls produced weak signals which was defined as unspecific binding (Supplementary Fig. S1).
Three distinct binding patterns are defined in our program: 1) "Unchanged" binding; 2) "Shift" binding; and 3) "Only" binding.
In these instances, benefits are defined and potential valuation methods suggested.
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com