Sentence examples for binding information provided by from inspiring English sources

Moreover, these methods fail to incorporate the motif binding information provided by matching DNA upstream sequences and TFs with whole genome sequencing techniques [ 1].

A future task can be the inclusion of distal binding information provided by the Encode project in addition to the Encode data we used for proximal binding to the TSS.

The second method, developed by Jiang et al. [ 30], refined Hu et al.'s result using the TF binding and gene expression similarity information provided by ChIP-chip data and gene expression data, respectively.

Some authors have further exploited the information provided by these binding peaks by devising priors that use coverage profiles as motif positional preferences [ 22, 23].

There are two main causes resulting this phenomenon: (1) many of the target genes identified by peak-based method may not be ER alpha targets according to TIP calculated probabilities; (2) gene set based inference cannot effectively capture the information provided by TF binding data from ChIP-seq experiments.

After acquiring 1 kb promoter sequences of miRNA genes and their coexpressed genes in FASTA format, the Match program [ 35] was executed for sequence motif search of transcription factor binding sites according to the matrix information provided by TRANSFAC (version 2011.4).

ReXSpecies post-processes the information provided by transcription factor binding site prediction tools, in order to compare data from many species.

The study was conducted under the following conditions: (i) the information provided by these GERB applications was not binding in any case.

The context information provided by the ten neighbouring residues was found to be optimal for DNA-binding site prediction [ 9, 10].

Additional information provided by NYC Fashion Info and MB Fashion Week.

We rely on information provided by Medicare".