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Other known C2H2 zinc finger binding genes were also used to search for any new families common to these bilaterians.
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Copper-binding genes were also suppressed in A24 (Table 3).
Genes such as chlorophyll-binding and copper ion-binding genes were also suppressed during the initial phase of infestation by aphids.
RNA binding gene was also induced during W2 infestation (Table 3).
Several Group-D (Os05g37170: TGand and Group-S (Os02g09830, Os02g03960: ocs-binding proteins) genes were also induced at phase-3.
Our data also indicated that the intestinal hydrogen peptide co-transporter (Slc15a1), follistatin (Fst), hyaluronan synthase (Has1), secretin (Sct) and lipopolysaccharide binding protein (Lbp) genes were also increased to a much greater extent by AMPH than EIH in the MAV (Table 6).
Other putative regulatory elements commonly found in SREBP (SRE-binding protein -targeted genes were also identified.
The MICA and MICB genes were also devoid of ATF4 binding (data not shown).
The SCCL-down genes were also enriched for RARA and RARB binding sites.
A group of immune-related chitin-binding protein genes is also likely to be strongly up regulated after WSSV infection.
The CUP1 (copper binding) tandemly-repeated genes are also significantly depleted in 3 of the 4 strains (Fig. 2, Table 2) and additionally show some intra-strain variation in copy number (Fig. 5B); depletion of the CUP1 genes has been observed previously in a wine strain [ 50].
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