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However, for allergenic proteins, linear IgE binding epitopes, which are based on sequence rather than structure, may be intact after denaturation (Thomas et al., 2007 ).
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The results from the present study will aid in the precise location of future atomic resolution structure fragments of the SARS spike, as well as in the structural mapping of neutralizing antibody-binding epitopes (which are in progress).
The difference suggests that mice may have additional laminin-binding epitopes, which are less susceptible to fukutin defects.
We prepared a series of compounds (42a– c) that we refer to as two-faced inhibitors that contain a benzenesulfonamide binding epitope, which is well-known to inhibit BCA via binding to the Zn-cofactor at the active site (Ka ≈ 10 10 M–1), and an ammonium ion binding face, which binds to CB[7] (Scheme 9).
These recombinant COMP molecules allowed us to select mAbs that are specifically binding to conformational COMP epitopes, which are highly dependent on the three-dimensional structure.
CG10 is one of a small group of monoclonal antibodies specific to CD4-induced epitopes, which are structurally associated with the chemokine receptor-binding site and are capable of blocking the interaction of gp120 with its obligatory co-receptor.
Thus, TAP-independent epitopes which are expressed on CMT.64 cells may not be presented on the DC's surface for T-cell priming, because these epitopes similar to the peptides presented on TAP-deficient RMA-S cells [25] generally display low ability for MHC-I binding, and therefore cannot compete with TAP-dependent epitopes for MHC-I binding and DC's surface expression.
The binding of the epitope, which is the immunogenic part of an invading pathogen, together with activation and cooperation from T helper cells, is required to trigger an immune response in the affected host.
Like mannose-binding protein, MGL has a monosaccharide-specific binding site that interacts with a simple epitope, which is characteristic of nonself oligosaccharides.
28 Prior to docking simulation, the influenza NP418 epitope, which was complexed in the binding groove of HLA-B*3501 HLA-B*3501ed by using AutoDockTools.
In our commercial assay, an antibody detecting an epitope which is dependent on S100A8/S100A9 heterocomplex formation and calcium binding was used.
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