Wang J, Zhuang J, Iyer S, Lin XY, Greven MC, Kim BH, Moore J, Pierce BG, Dong X, Virgil D, Birney E, Hung JH, Weng Z. Factorbook.org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium.
The binding data generated in the current study (RXRα and RARα) were compared with the binding data of PXR, LXR, FXR, and PPARα.
The chromosomal locations of AGO2 binding sites were retrieved from the CLIPZ database [68], which releases RNA-binding protein (RBP) binding site data generated by cross-linking and immunoprecipitation (CLIP) mapping technique.
Assuming that we apply these MAC approaches, the binding of data generated by MD5 or SHA-1 will contribute 128 bits or 160 bits to the provenance size at each node respectively, which is very expansive for resource-tightened WSNs.
Comparison of the HNF4A consensus-binding sequence from our data generated by ChIP-MEME with the previously defined sequence.
Tup1 protein binding sites were derived from ChIP-seq data generated by Wong and Struhl (NCBI accession no. SRA044839.1) using the algorithms and parameters described by the authors [23].
A mechanistic model of specific probe binding has been developed and used for quantifying qPCR data generated by hydrolysis probes [7].
Indeed, data generated by the epitope-mapping peptide array hint to a specific binding to the VEGF receptor binding domain on ΔNΔC-VEGF-C.
The vast amount of high-throughput data generated by ENCODE has provided tremendously valuable resources but we realized that the numbers of YY1-binding loci provided in original ENCODE datasets are large.
