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How many SH3 binding consensuses are present in different instances?
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p53 is a sequence-specific transcription factor whose DNA-binding consensus is present in a large number of promoters.
Sufficient conditions for consensus are presented and the consensus protocol accounting for actuator saturation is developed.
capsulatus FnrL regulon is comparable to that observed for the FnrL regulon from Rba. sphaeroides, which has 917 genes DEG's with p-value ≤ 0.05 We also note that several FnrL ChIP-seq peaks containing well-defined FnrL binding consensus sequences are present upstream of DEGs with p-values between 0.05 and 0.1.
A database search also indicates that consensus GATA binding sequences are present in other commercially available Renilla luciferase encoding plasmids; therefore, the latter can potentially be transactivated by GATA transcription factors.
In addition, E-box consensus sites are present in 7/10 ECC-PNST shared binding regions, 6/8 of the Limb-PNST binding regions, and 5/6 of the ECC-Limb-PNST shared binding regions.
A greater proportion of evolutionarily conserved predicted Lhx1 consensus binding sites were present within proximal regulatory regions of SCN-enriched genes relative to randomly selected genes.
From this analysis we found that consensus Foxh1 binding sites were present in 24% and 43% of Eomesa and Smad2 ChIP-seq peaks, respectively, but occurred in 51% of common Smad2/Eomesa ChIP-seq peaks (see Additional file 9: Figure S5 and Additional files 4, 10 and 12).
The consensus ATP-binding motif is present in UspE domains 1 and 2 of Rv2623 (3CIS), MJ0577 (1MJH), TTHA0895 (2Z3V), and AT3G01520 (2GM3), which have been previously shown to bind ATP (AMP for AT3G01520).
The activated p53 binds to its DNA-binding consensus sequence that is present in its target genes [15].
Then, two corresponding distributed consensus protocols are presented.
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