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Assembled complexes can be used in high-throughput DNA strand transfer assays if radio labeled target DNA is employed or in integrase binding assays using a suitable radioligand.
The interaction was further confirmed by in vitro binding assays using a GST-hnRNP-K fusion protein bound to glutathione-sepharose 4B beads.
Competition ligand binding assays using a range of ligands with A2AR SMALP were consistent with established A2AR pharmacology (International Union of Pharmacology (IUPHAR) database) and comparable to A2AR binding in the original yeast membranes (Table 1).
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To test whether the spliceosomal RNAs bind nonspecifically, we repeated the binding assays using an N-terminally MBP-tagged MS2 dsRNA binding protein (MBP-MS2BP) that interacts with the MS2 RNA hairpin loop.
Briefly, uptake and binding assays used a high sodium, low potassium buffer containing glucose and tropolone, and the non-specific binding was defined with 1 μM CFT as in our previous work.
The GAG content of each sample (n = 3) was quantitated by using a 1, 9-dimethylmethylene blue (DMMB, Sigma) dye binding assay, using a standard curve generated by chondroitin sulphate B. The absorbance was read at a wavelength of 525 nm.
This assay is a single-step primary binding assay using a single reagent - the QD-labeled antigenic peptides.
Induction of apoptosis was studied by annexin V-FITC binding assay using a kit from Beckman Coulter.
To screen chemical libraries for active molecules we developed an in vitro fluorescence microscopy-based binding assay using a recombinant Ndc80 complex and taxol-stabilized MTs.
In addition, the DNA binding ability of C4 protein was proved to be unspecific by protein-DNA binding assay using a 1 kb DNA ladder of linear dsDNA fragments.
For example, a competition binding assay using a fluorescent antagonist for A3 receptor (Table 1 and 2) and a high-content screening system for the automated capture and analysis of images was developed.
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