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Tumors from 4 different control mice showed patchy regions of high EF5 binding, consistent with heterogeneous binding and the presence of markedly hypoxic tumor regions (panels i-iv).
These subtle differences may have a considerable impact on cyclin/Cdk specificity, but other factors such as cyclin abundance, substrate binding and the presence or absence of substrate proteins may also play a significant role.
Alexa Fluor 488-labeled goat anti-rabbit IgG (Invitrogen/Molecular Probes, Eugene, OR) diluted 1∶2000 and fluorescent nucleic acid stain, 4'6-diamidino-2-phenyl-indole dihydrochloride (DAPI) (Invitrogen/Molecular Probes) diluted to a final concentration of 0.25 µg/ml in blocking buffer were used to detect antibody binding and the presence of spirochetes, respectively.
A clear shift toward 540 nm is observed, indicating binding and the presence of amyloid.
Thus the biochemical properties of the heterodimer are sufficient to explain the nearly 1 1 correspondence between ATF4 binding and the presence of hybrid motifs in vivo.
However, similar results compared to those presented here were observed concerning hypoxia binding and the presence of small lipid droplets in the hypoxic cells adjacent to necrosis.
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Collectively, the results suggest i) the existence of novel intermediary steps (e.g. missing cellular processes, proteins or phosphorylation states) between extracellular poly (I∶C) stimulation and intracellular TLR3 binding, and ii) the presence of a novel pathway which is essential for JNK and p38 activation.
From dynamic simulations we predict i) the existence of missing intermediary steps between extracellular poly (I∶C) stimulation and intracellular TLR3 binding, and ii) the presence of a novel pathway which is essential for JNK and p38, but not NF-κB, activation.
The unique shapes displayed in Figure 3 derive from a combination of properties for the presented TF's binding motifs such as width of the binding site, and the presence of other motifs enriched at the peakMax (see Additional file 1: Text S1 for further detail and discussion).
The contribution of electrostatic interactions to the binding of RPA32C targets is evident from the charge complementarity of the acidic RPA32C binding surface and the presence of multiple basic residues in the target binding motifs.
Spastin also displays an adjacent microtubule binding sequence, and the presence of both ESCRT-III and microtubule binding elements may underlie the recent findings that the ESCRT-III disassembly function of Vps4 and the microtubule-severing function of spastin, as well as potentially katanin and fidgetin, are highly coordinated.
More suggestions(15)
binding and the protein
binding and the resultant
binding and the ratio
binding and the agency
binding and the president
binding and the progression
binding and the structure
binding and the actin
binding and the octapeptide
binding and the reform
binding and the chromatin
binding and the activation
binding and the war
binding and the chastity
binding and the ligand receptor
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