Sentence examples for binding affinity according to from inspiring English sources

The docking score of autodock4 was chosen to evaluate the binding affinity according to binding free energy.

Finally, a heptapeptide is designed for a protein that has excellent binding affinity according to AutoDock results.

After simulations, three mutant aptamers, Seq2 mutated at position "12" and position "35," Seq15 mutated at position "12" and position "35," and Seq15 mutated at "15" and "38," showed high binding affinity (according to the ZRANK scores) to Ang2 compared with their original aptamers.

The resulting database comprising normalized hybridization signals from about 1000 different single MM probe sequences, enables categorization of the binding affinities according to the mismatch type.

However, the binding affinities varied according to the order: f-ImPy∗Im (2) > f-ImPyIm (1) ⩾ f-Im∗PyIm (5) confirming that the second amino group can improve affinity, but its position within the polyamide can affect affinity.

From the dataset we define a two class problem by assigning to each kinase inhibitor pair "binding" or "no binding" according to the measured affinities of interaction read out by quantitative PCR.

To normalize our RRS1 measurements, we used as a nontarget control THI6, based on the criteria that it did not show any notable predicted binding affinity for Puf4p according to our PSAM, was not enriched for Puf4p binding in the study by (Hogan et al. 2008), and showed no significant expression difference after IRA2 allele replacement (Smith and Kruglyak 2008).

Because the effect of some ubiquinone analogs depends on the cell line, we propose that the affinity of these sites for one particular quinone, as well as the secondary changes in the PTP Ca2+ binding affinity, may change according to the cell line.

Then the dissociation constant [ KD (M ], a primary parameter for binding affinity, was calculated according to the formula KD= kd/ ka.

This increase in hydrophobic contact surface area with respect to BENSpm is expected to improve the binding affinity of CPENSpm, according to known semiempirical expression of the relationship between contact surface and hydrophobic interactions energy [ 33], as indeed observed experimentally (Table 3).

For each window encompassing the SNP, we compute the change in the affinity of binding according to the preselected PWM and then estimate the significance of this change.