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However, the efforts needed to develop small molecule binders with high affinity and specificity are substantial.
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Instead, PCR using randomized CDR3 sequences has been used to construct more diverse synthetic libraries, resulting in binders with higher affinity and specificity to target antigens [ 10, 12].
Although the superposition around this site is not perfect, both ligands remain potent binders to the σ1 receptor, with high affinity and selectivity.
HNP1 3 can bind to CD4 and HIV-1 gp120 with high affinity; however, HNP4, which is a much weaker binder, is a more potent inhibitor, meaning this aspect of direct inhibition is not, currently, entirely clear [ 73].
The strongest binders were found in the group with phosphocholine linked to the polypeptides 4-C37L34, 4-C10L17, and 4-C25L22, withathat of 4-C10L17 being the binder molecule with highest affinity in most applications.
One binder was subjected to affinity maturation to derive an autonomous VH domain (VH-V1a) that recognized both human and mouse VEGF with high affinity (KD = 16 nM or 10 nM, respectively).
The antibody recognizes LND with high affinity.
With the aim to identify cyclin B1-derived peptides with high affinity for HLA-A2, we used three in silico prediction algorithms to screen the protein sequence for possible HLA-A2 binders.
Consequently, a number of putative domain binders with both high affinity and specificity were identified, from which the Src SH3 domain was selected as a case study and tested for its binding activity towards the sacum peptides.
The conjugation of small organic molecules or short peptides to polypeptides from a designed set provides binder molecules that bind proteins with high affinities, and with selectivities that are equal to those of antibodies.
Again, the peptides that bind proteins need not bind with high affinities, because polypeptide conjugation enhances binder performance.
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