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Besides the inherent capacity of IRFs to function as transcription factors, they selectively bind to a group of proteins, namely immunophilins.
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PfEMP1 is thought to bind to A and B sugars and a specific variant from a rosetting parasite clone binds to the group A trisaccharide via the DBLα domain (Ref. 95).
This red flag--usually consisting of peptides bound to a group of molecules called the major histocompatibility complex (MHC --are recognized and destroyed by iMHC --arels such as cytotoxic T lyMHC --are (CTLs).
It is bound to a group of inhibitory proteins called IκB.
The Rev protein then binds to a group of host proteins called the Crm1 export complex to send the viral RNA molecules to the cytoplasm.
They then found that DNA bases could bind to a sulfur group in one of the amino acids, cysteine, creating a protein-DNA hybrid strand.
This inhibitor is an anilquinazoline derivate, and inhibits activation of kinases by covalently bind to a cysteine group of the kinase.
No evidence for binding was observed for the other peptides; this suggested that the Grb2-SH2 domain will not simply bind to a phosphoryl group presented in the correct peptide context, or to an aromatic ring.
All of the AUF1 isoforms contain two RRMs through which they bind to a select group of mRNAs, including many mRNAs that encode stress-response, immune, and proliferative proteins such as p21, cyclin D1, myc, fos, GM-CSF, TNF-α, IL-3, parathyroid hormone (PTH), and GADD45α [ 21- 27, 28, 28].
Noroviruses have been observed to selectively bind to group A, H, and difucosylated Lewis blood groups [ 46, 47], and only volunteers who were secretors of these antigens were found to be susceptible to norovirus gastroenteritis [ 4].
Table S1 in Additional File 1 shows how often an inhibitor binds to a certain group of kinases (group in a phylogenetic meaning).
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