Sentence examples for binary masks of the from inspiring English sources

CaV1.2 cluster area sizes were determined using binary masks of the images in ImageJ/Fiji.

To this end, binary masks of the prescribed voxel volumes were first generated in the space of the FSE images.

Binary masks of the RE were generated from thresholded BFP-Rab11a images and for endosomal EGFR from thresholded EGFR-mCitrine images.

Mean fluorescence intensities of EGFR-mCitrine and pY845 at the RE were obtained by using binary masks of the RE, generated from thresholded BFP-Rab11a images.

Volume was measured in 3D reconstructions using custom-made image-processing routines written in SCIAN-Soft, which involved thresholding, manual and automated segmentation, and generation of binary masks of the habenular neuropil and IPN.

Neuropil masks were generated in the JFRC2013 standard brain by alignment to the binary masks of the neuropils defined in Ito et al. (2014), followed by manual editing of the neuropil borders guided by the nc82 staining of the JFRC2013 brain.

Given a binary mask of the K-means segmentation, we assign the superpixels having 80% positive pixels as foreground candidates and their dilated superpixels as background candidates.

First, a global threshold value is determined by Otsu's method [6] and image thresholding is performed to extract the binary mask of the foreground, i.e., the particle region on an image.

Nuclear regions were selected manually and multiplied with a binary mask of the respective ROIs to obtain the mean centromeric fluorescence intensity.

A binary mask of the cell with the inside set to 1 was obtained by a separate customized Matlab program using the gray scale images with black background that was previously generated.

For each frame, the phase image is converted to a binary mask of the cell colony.