Sentence examples for binary interactions in the from inspiring English sources

We have tested more than 3,500 pairwise combinations for binary interactions in the YTH analysis, and identified 79 potential interactions that involve 37 proteins.

We first use the entire high-quality binary interactions in the HINT database (version 6/17/2015) as a gold standard [ 29].

To examine whether Xrc4 and Lig4 can engage in a binary interaction in the absence of other S. pombe proteins, we used the yeast two-hybrid assay.

This can be seen in our (and others') yeast two-hybrid results showing a binary interaction in the absence of MAD2, and our size-exclusion chromatography analysis showing that a small amount of p31(comet) shifts into the TRIP13 hexamer peak in the absence of MAD2.

BinGO, DAVID and Webgestalt built-in statistical modules automatically compute the enrichment of specific pathways or gene ontology terms for every binary interaction in the network, and can be customized to calculate significance by the Fisher's exact test and the multiple test correction techniques Benjamini, Bonferroni and FDR for larger gene lists.

This integrated data set is represented as an undirected, unweighted network, where G = (V,E) comprising of a set of nodes V and edges E. Each node represents a human gene and each edge represents a pair of genes (u,v) as a representation of a binary interaction in the human interactome.

After installing the plugin, the user starts by loading the network of interest (denoted query network) represented by binary interactions in Cytoscape and launching the ConsensusPathDB plugin through Cytoscape's 'Plugins' menu (Fig. 1A).

The analysis is restricted to binary interactions in order to make consistent Y2H-based interactions and the remaining maps.

In this paper, we have presented a new network topology-based method to identify binary interactions in co-complex interaction network which is induced from AP-MS data.

As an alternative, we evaluate our method using known binary interactions in public databases and other three reference sets that provide less direct evidence for physical interactions [ 13, 33].

To create two noisy versions of the data, Gaussian noise with mean 0 and standard deviations of 10 and 20 was added to the original scores [which were in the range ], which were then converted to binary interactions as in the original dataset.