Sentence examples for bin code from inspiring English sources
In case of disagreeing hits the BIN code "35.3 not assigned.
The glycolytic pathway corresponds to the bin code 4. The first five lines of the table generated by dbWFA for this query are shown above.
Differentially expressed genes were grouped into eight clusters (Additional file 2 and 3), classified into functional groups using the MapMan bin code [ 20] and ordered by pathways.
This was done by identification of Wilcoxon rank sum test enriched Bin codes.
This was used to find homologus TAIR identifiers and then parse the corresponding Bin codes from Mapmans Arabidopsis mapping file and convert to R. stricta.
Even though the complexity of the transcriptome cannot yet be fully appreciated, we developed a tool to easily and promptly obtain information from multiple functional annotation systems (Gene Ontology, MapMan bin codes, MIPS Functional Categories, PlantCyc pathway reactions and TAIR gene families).
A detailed list of genes with the respective bin codes belonging to each MapMan category is reported in Additional file 8. To understand the hormone-related transcriptional response of the berry to the auxin treatment, a HORMONOMETER analysis was carried out relying upon putative hormone indexes whose transcript levels were measured by means of the microarray.
Additionally, MapMan was used to group the SuperSAGE tags into several functional categories (BIN-codes) [ 73].
Additionally, MapMan [ 73] was used to group the SuperSAGE tags into distinct functional categories (BIN-codes).
The data were then BLASTed against Arabidopsis (TAIR) to identify Arabidopsis homologues, which then could be sorted to the BIN-codes (workflow: Additional file 5) and only log2-fold changes of at least 1.5 were further examined (Additional file 6).
The statistical tests were performed in Matlab 2013b on an AMD phenom II X4 820 (2.80 GHz) machine, equipped with 4 GB DDR3 RAM running MS Windows 7. Probability binning codes were written to be equivalent to those described in published studies.
