JSON data files for 78 Flux Balance Analysis models (LP problems) from the BiGG database.
Genome-scale metabolic core models of E. coli downloaded from BiGG database were employed to perform all simulations in silico (Schellenberger et al. 2010).
The large scale model of cell metabolism included the set of metabolic reactions listed in the Table S1, which were compiled from the BiGG database [42].
As a representative token, we use the in silico reconstruction of the bacterium E. coli [28] compiled by the Systems Biology Research Group at UCSD available at the BiGG database [29] (other metabolic networks will be extensively analyzed elsewhere).
The data is available at the BiGG database (http://bigg.ucsd.edu/).edu/
SBML models of metabolic networks were obtained from the BiGG database [ 42].
The reaction directionality was assigned in accordance to the directionality listed in the BiGG database.
However it was found as an entry in BiGG database [ 26].
The content of this knowledge base will be easily accessible through the BiGG database.
We downloaded the E. coli and S. cerevisiae model from the BiGG database [ 39] http://bigg.ucsd.edu/.edu/
