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DEA concentrations can be very different between two samples with a 15-day time step.
The relationships of the volumetric water contents and the matric suctions between two samples with different initial void ratios are established.
Isobaric peptide labels are typically used to determine relative quantities of a peptide or protein between two samples with no information gained on abundance differences between protein species.
DEGseq is a free R package to detect DE genes between two samples with or without replicates of RNA sequencing data [ 62].
The normalized M value was then used as a quantitative measure of differential binding in each peak region between two samples, with peak regions associated with larger absolute M values exhibiting greater differences in binding.
Differential display uses arbitrarily primed PCR to fingerprint differences (from first strand cDNA) in gene expression between two samples, with the results being determined by the intensities of bands on a polyacrylamide gel [ 10].
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Differences between two samples were tested with paired, two-tailed Student's t-tests.
In Kaplan Meier curves, the discrepancy between two samples was compared with Chi square test.
The differences between two samples were detected with the two-tailed Mann Whitney test or Student t-test.
In our work, the changes in relative abundance for unigenes between two samples were screened with the threshold: q-value ≤ 0.005 and log2Ratio ≥ 1 or ≤ -1.
Statistical comparison between two samples was performed with a custom script using the algorithm of Audic and Claverie (1997), with FDR < 0.001 and the absolute value of log2 ratio ≥ 1 as criteria for significantly different gene expression.
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