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Nodes represent families, links between two nodes are associations with offspring common to both families.
The constraints representing a relation between two nodes are modeled as graph edges.
If some connections between two nodes are used more intensely than other point-to-point connections, this will have a bigger impact on the network.
Edges between two nodes are drawn if any candidate compound assigned to the outgoing node can be metabolized to any candidate compound assigned to the incoming node by means of a known biochemical reaction (Supplementary Fig. S3).
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The data between two nodes is transmitted in packets.
Every connection between two nodes is defined as an edge.
In heterogeneous network, the geometric distance between two nodes is not proportional to their hop count.
The distance metric between two nodes is obtained by computing the exclusive or (XOR) value.
The pairwise connectivity between two nodes is one if this pair is connected and zero otherwise.
Long distance, whenever the distance between two nodes is higher or equal to 200 m.
Thus, the PDF of the distance between two nodes is given by.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com