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Based on the distance between two adjacent loci, Haldane's mapping function was used to calculate the probability of having a recombination between adjacent loci on the same chromosome.
To compute the standard separation for neural responses, Dneuron, we adapted Equation 1 such that μx and μx+Δx represented the mean firing rates between two adjacent loci separated by Δx and σx and σΔx the respective standard deviances.
The probability of having a recombination between two adjacent loci on the same chromosome was calculated using Haldane's mapping function based on the distance between the loci.
The recombination probability between two adjacent loci on a chromosome is calculated from the Haldane mapping function [ 15], which is the most widely used mapping function.
This assumption essentially ignores the case that multiple 'coincident' recombination events between two adjacent loci result in no IBD changes, the probability of which is extremely small given the high density of SNP markers available today.
The cR unit measures the frequency of co-retention of two marker loci (i.e, one cR is one difference of the state (deleted vs. retained) between two adjacent loci observed in every 100 lines screened).
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Recently a model of genetic incompatibilities between three adjacent loci: S1A, S1 and S1B (called together the S1 regions) interacting epistatically, was postulated to cause the allelic elimination of female gametes in interspecific hybrids.
Thus, the difference in fruit weight that was observed between the two fructose types may arise from a physical connection between the two adjacent loci.
In Table 3, the rows indicated by r = 0.1, 0.01, and 0 describe results corresponding to a case in which the per-generation recombination fraction between any two adjacent loci are 0.1, 0.01, and 0, respectively.
Highest LD between the candidate locus and one of the two adjacent loci.
For 12 samples, this involved a null allele in two adjacent loci suggesting a large and recurrent deletion as the samples represent three distinct haplogroups.
More suggestions(15)
between two homologous loci
between two adjacent buckles
between two adjacent stations
between two adjacent values
between two adjacent walls
between two adjacent neighborhoods
between two adjacent ridges
between two adjacent ZCs
between two genomic loci
between two adjacent edges
between two unlinked loci
between two adjacent sensors
between two nuclear loci
between two adjacent layers
between two interested loci
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