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In only one spacer (a13) among the seven, the G, which is the second nucleotide from the last one, was replaced by C. Twelve proto-spacers lay between two adjacent genes in the Y. pestis genome (marked in grey shade, Table S2).
Specifically, we consider a set of m marked genes forms a cluster with maximal g insertions allowed between two adjacent genes.
Gene deserts were defined as regions of greater than 1 Mb between two adjacent genes, with the 10 kb proximal to each gene removed.
It should be noted that genes are located very close to each other in a prokaryotic genome; at times without any long intergenic region between two adjacent genes.
Previous approaches use cut-offs on operon lengths [ 27], or the distance between two adjacent genes [ 28, 29] e.g. the Gene Gap Method [ 30].
On the other hand, methods based on the distance between two adjacent genes may result in large operons in species with short genomes.
Similar(42)
In the neighbourhood model, two genes x and y are in a cluster if and only if the distance between any two adjacent genes locating between x and y is less than a fixed threshold (D).
The difference in upstream DNA methylation, Δ CpGO/E, was calculated by the absolute value of the difference in CpGO/E between the two adjacent genes compared.
Entire sequence span between coding sequences of two adjacent genes are used without predicting transcription factor binding sites.
TSS_Region: Ingenic - the predicted site lies within the coding region of an annotated gene; Intergenic - the predicted site lies between the coding sequences of two adjacent genes.
We have discovered a case of HGT, involving two adjacent genes, between the genomes of Wolbachia and the currently Wolbachia-uninfected mosquito Aedes aegypti, an important human disease vector.
More suggestions(15)
between two nearby genes
between two connected genes
between two adjacent dna
between two adjacent regions
between two annotated genes
between two homologous genes
between two adjacent walls
between two adjacent peaks
between two apoptotic genes
between two adjacent edges
between two adjacent layers
between two observed genes
between two adjacent stations
between two adjacent values
between two maternal genes
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