Sentence examples for between three isolates were from inspiring English sources

The substitution rates (non-synonymous substitution rate per non- synonymous site (dN) and synonymous substitution rate per synonymous site (dS)) and the ratio of the dN/dS for the orthologous protein-coding sequences between three isolates were estimated with the M0 model in PAML (Yang, 2007).

When the differences in L1 ORF nucleotide sequences between two isolates are within 2 5%, they are regarded as subtypes; differences below 2% are referred as variants.

Genome sequencing not only represents the most sensitive subtyping approach conceivable, but also provides for specific identification of differences between isolates, which can be used to assess whether differences between two isolates are likely to have occurred within a short time frame or not.

Notably, mean relative SNP distance between two isolates was highest within the resistant ST131 among these four MLST lineages, thus indicating that the identified reduction in core genome recombination cannot be plausibly explained by the lineage being "younger" and less diverse than the other lineages.

Other genes differentially regulated between the two isolates were the pseudogene dcmH encoding a methyltransferase, pilT encoding the type IV pilus retraction protein, pdxH encoding a pyridoxamine 5'-phosphate oxidase involved in vitamine B6 metabolic pathway and hypothetical proteins or proteins without known function.

Between one and thirteen isolates were available from each patient, depending on their lengths of stay.

Cross-contamination of specimens was unlikely to have occurred at the laboratory at which cultures for M. tuberculosis were confirmed; several months passed between the times the two isolates were identified and subsequently sent to the Centers for Disease Control and Prevention for genotyping.

ST75-MRSA-IV: Eighteen isolates were collected between 2003 and 2008.

Nineteen isolates were recovered (between July and October of 2004) from patients >48 h after admission and these were classified as HA-MRSA (Table S1).

Nineteen isolates were also obtained between 2002 and 2004 from Pakistani pediatric (PP) clinics located in the urban slums of Karachi [ 9, 10].

Twelve pneumococcal isolates were from children under the age of five years; two isolates were from children between 5 and 18 years old; 82 isolates were from adults between 18 and 64 years old and 60 were from older adults (65 years old and above); one isolate had no age information.