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The composition of these two sub-clusters is summarized in supplemental Table S6.
The main distinctive features between these two sub-clusters were panicle stature at maturity and pericarp (or seed) colour.
Average similarity between the two major clusters was 20%, while that between the two sub clusters was 34%.
While BO and LO were almost entirely composed of sub-cluster A and B, these two sub-clusters made up at least 55% of all other countries (except for GE which was devoid of sub-cluster A; Figure 5B).
Different from the results in Figure 4B, these two sub-clusters neither are the subunits of some complex, nor have functional relevance.
Both can be considered polygenic traits which may explain why farmer selection practices have resulted in large genetic differences between the two sub-clusters, as is shown by the molecular data.
Another important difference between the two sub-clusters is fever.
The transitions between the 7- cluster and 4- cluster solutions include the merger of two sub clusters into Cluster 1 and the merger of three sub clusters into Cluster 3.
Within C1, a sub-cluster was highly altitude sensitive, and within C3 two sub-clusters were comparatively altitude insensitive.
In clusters A and B, six and two sub clusters can be determined, respectively.
It should be noted that the Spanish Merino from Andalusia occupies a central position between these two sub-branches close to the Spanish non-Merino breeds, while the Estremadura Merino is integrated in the Merino cluster.
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