Sentence examples for between these two assemblies from inspiring English sources

Beyond the 3.1% segmental duplication regions, there are other types of differences between these two assemblies, such as deletions, inversions and translocations.

Comparisons between these two assemblies revealed substantial differences that appear as assembly errors, genome segmental inversions, chromosomal placements, sequence gap numbers, and discrepancies of the sequence coverage across the bovine genome [ 11– 13].

These two assemblies were nearly identical.

ChrX is the chromosome showing the largest difference between the two assemblies, with strikingly fewer assembled sequences in Btau than UMD (88.5 Mbp versus 148.8 Mbp, respectively).

Surprisingly, only 448 contigs are identical between the two assemblies based upon results of a BLASTN alignment [30].

The gene conversion characteristics were indistinguishable between the two assemblies (data not shown).

For the current work, our focus was on the differences between the two assemblies.

First, we used MUMMER Nucmer [ 64] to detect orthologous sequences between the two assemblies.

The average proportion of heterozygous genotypes per marker was comparable between the two assemblies except for chromosomes 2A, 3D, and 4A, where differences between the two assemblies were large.

There are 2 single nucleotide differences between the two assemblies mapping to IFNA17 and one dinucleotide difference.

Further, we observed very similar numbers of isogroups, isotigs, and singletons between the two assemblies (Additional file 7).