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Average similarity between the two major clusters was 20%, while that between the two sub clusters was 34%.
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Both can be considered polygenic traits which may explain why farmer selection practices have resulted in large genetic differences between the two sub-clusters, as is shown by the molecular data.
Another important difference between the two sub-clusters is fever.
Each of the six sub-clusters obtained in the hierarchical clustering was independently annotated.
Furthermore, three sub-clusters could be identified within cluster 3, where sequences in two of the three sub-clusters were recovered only from site S2 and the third group was retrieved from all sampling sites.
The transitions between the 7- cluster and 4- cluster solutions include the merger of two sub clusters into Cluster 1 and the merger of three sub clusters into Cluster 3.
The main distinctive features between these two sub-clusters were panicle stature at maturity and pericarp (or seed) colour.
between the two sub-statuses.
One contained the two unprotected surface samples that had been bored by Xylophaga spp. The second cluster contained two sub-clusters: one that grouped the two wood centre metagenomes and the other one with the two protected surface samples.
The cluster III regroups two sub-clusters.
The cluster II comprises two sub-clusters (II1, II2).
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