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The maximal size of the lost region is determined as the distance between the two normal clones flanking the lost clones.
The similarity in amylase activity between the two normal groups throughout the experiment supports our other findings which suggest that treatment with B. forficata decoction is not toxic.
Our analysis indicated that DNA CN values were similar between the two normal tissues (Additional file 3 - Table S1), as expected.
For comparison of the gene expression and the copy number variation, the 500 top-ranked differentially expressed genes between the two normal and the two tumor samples were computed.
Comparisons between normal white blood cells and normal oral epithelium showed that even though LINE-1 methylation levels are different, the number of hypomethylated loci was not distinguishable between the two normal tissues (Fig. 4).
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We first analyzed whether copy numbers were similar between DNAs from the two normal tissues: germ-line (blood) and micro-dissected adjacent normal samples.
The item difficulties were drawn from the percentiles of the item distribution defined as an equiprobable mixture of two normal distributions N(− a 0.1 x) and N a; x) where a is the gap between the means of the two normal distributions.
We calculated the difference in rank between the ten normal sperms and the other sperms.
The remaining entropy and energy components were not taken into account because they did not discriminate between the two groups (normal and cardiovascular risk subjects) with statistical significance.
The correlation between the two prototypical normal profiles was 0.999.
To compare the co-expressions between the two groups (normal vs malignant), the z-statistic of Fischer was used on the Spearman correlation matrices (Table 4-wrap>).
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