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The exception in these clusters is gene 7-4, which displayed inconsistent light inducibility between the two array platforms and low absolute expression according to the NSF45K array; it is excluded from the following analysis.
Although the percent methylation estimates for each CpG varied somewhat between the two array platforms, differences between never, former, and current smokers for each of the eight CpGs were similar between the two array platforms (Table 2).
This was performed by determining the difference in genomic length for each location between the two array platforms and then selecting the minimal distance.
P values are from the two-sample t-test, and "match direction" refers to the comparison between the two array experiments.
The fundamental difference between the two array platforms poses a technical barrier in integrative analysis of gene expression data based on these two different platforms.
This comparison was limited, however, by a 27%% concordance for clone IDs and 75%% concordance for gene symbols between the two array platforms used within these studies [ 40].
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A difference in the operating voltage of only 80 mV was found between the two arrays.
Only the translations between the two arrays on the X and Y direction were corrected, while a possible relative rotation was not taken into account.
In the semisingle-sided sensor, the distance between the two arrays of magnet bricks was chosen in a way that 1.5-L bottles fit in the gap of the magnet system.
For JPEG images, the distortion between the two arrays of quantized DCT coefficients, X and Y, is computed by first decompressing the JPEG files to the spatial domain, and evaluating the distortion between the decompressed images, J-1(X) and J-1(Y), in the same manner as in (3): D ( X, Y ) ≜ D J - 1 ( X ), J - 1 ( Y ).
The baselines on the ASICs were finely tuned to correct for the difference in the mean bias voltage between the two arrays, and they were set to have the same number of events above the validation threshold on both tiles (with the crystal alone and no other radioactive sources).
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