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Mass spectrometry based metabolomics approach can provide significant information about the discrimination between the species using multivariate statistical analysis, classifying chemical groups, discriminate the metabolites with unknown biological potencies [338].
To this end, we investigated genetic differentiation between the species using mitochondrial and nuclear markers and related their relative abundance with environmental parameters.
We also performed syntenic comparison between the species using mVista [ 47, 48].
In this work, we first quantify the neutral divergence between the species, using silent positions in coding sequence.
The multiple alignment was used to calculate the distances between the species using protdist from PHYLIP (Felsenstein, 1993), a package of programs for inferring phylogenies.
Corresponding UniProt Accession Name (Uniprot_AC) was obtained for each mapped Entrez Gene ID between the species using the ID mapping file for each organism from 1.
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(A) Evolutionary tree showing the relationship between the species used in the activity about systematic.
Figure 8 Evolutionary relationship between the species used in the activity about systematic.
The authors detected some errors in the representation of evolutionary relationships between the species used to illustrate the activity about systematics (Campos and Sá-Pinto [2013]).
While the germination rates of basidiospores were different between the species used (Table 4), possible effects by densities of the own basidiospores in the solutions were not further tested.
We contend, therefore, that competition between the species used in this study is reduced, at least in part, because of inter-specific differences in feeding and digestion rates [37], although we cannot discount the importance of the occupation of different sediment depth strata as a further mechanism of reducing inter-specific competition for space and resources [23].
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