Sentence examples for between the reads from inspiring English sources

Finally, SNPs were mined between the reads contained in an MSA.

Because MAQ calls a SNP as being any difference between the reads or between the reads and the reference genome, the initial MAQ SNP prediction output is large and must be filtered.

If the standard deviation between the reads of a triplicate sample was above 10% the measurement had to be repeated.

SNPs were predicted when an observed difference between the reads and reference sequence occurred at a sufficient rate among all the reads that cover the position.

The software guarantees finding all alignments between the reads and the reference sequences with up to M mismatches (a user-specified parameter).

The basic assumption, can be made more precise, by additionally taking into account the facts that the sequence reads could come from either Watson or Crick strand, and that if two strings are part of a mate-pair then the estimated distance between the reads imposes an additional constraint, not to be violated.

In the following section we explain how we use the similarities between the reads for compression.

The assembly criteria were set as 40 bp overlap size and 90% identity between the reads.

This indicates that Mince is better able to identify and exploit sequence similarity between the reads than other approaches.

Because the overlap graph method assumes similarities between the reads in sequence assembly, it is able to eliminate heterozygous bases.

In the first phase of the algorithm, reads are grouped into groups based on overlap information between the reads.