Sentence examples for between the native sequence from inspiring English sources

The order of codons was the only difference between the native sequence and this artificial coding sequence.

The threading score, originally termed as the relative score in Cao et al. [28], is defined by the difference between the raw threading score of the native sequence and the average of those of randomly shuffled sequences.

Both models produce an energy gap Z fold (eq. 14) between native and random conformations for the native sequence for 100 proteins in a structurally diverse test set.

Figures 4a-c show that the energy of the native sequence is always straddled between the energies of the random sequences and the designed sequences.

Despite a stability gap between random sequences (and structures) from the native for both methods, the native sequence is not near enough to a thermodynamic stability optimum to prevent directional selection.

The best sequence showed micromolar inhibition, which is a 3 15-fold improvement over the native sequence, depending on the donor.

This indicates that the native sequence does not adopt the global minimum in the sequence space.

The fact that the energy of the native sequence lies at the tail end of the random sequences (40 million, as indicated by curves 1 4), clearly shows that the energy of the native sequence is minimized in the sequence space.

GC content was computed over the native sequence.

Both types of scoring function assume that the native sequence lies close to (within a neutral sequence network of) a thermodynamic optimum, and that there is a gap in energy between the native state and the closest non-native state [ 12].

The slope in the random sequence was similar to that in the native sequence (−3.49 for random sequence and −3.56 for native sequence).