Sentence examples for between the microarray ratio from inspiring English sources

Therefore, to further address this question statistically, we evaluated the linear relationship between the microarray ratio (fold change) and the real-time PCR ratio for mibta52b allele at 72 hpf using Pearson's correlation coefficient.

The CORR procedure in SAS 9 (SAS Institute Inc., Cary, NC, USA) was used to calculate Spearman's rank-order correlation coefficient and test whether the correlation between the microarray ratio measures and qPCR ΔCt equalled zero for each EBV miRNA or pre-miRNA set.

Relative ratios were then calculated for each cell type in a manner similar to the microarray ratios in order to allow relative comparison between data sets.

The RT-PCR ratios were then compared to the microarray ratios (Table 3).

There is good correspondence (r2 = 0.846) between the RT-PCR log2 ratio and the microarray log2 ratio.

Attesting to the quality of the array were: 1) the concordance of gene regulation within the operons, 2) the agreement of results between this and previous transcriptional studies of Pasteurellaceae under conditions of iron limitation [ 26- 29], and 3) the high correlation between the microarray and qPCR expression ratios.

Utilizing the B. bronchiseptica long-oligonucleotide microarray, ratio data collected from microarray analysis involving the direct comparison between B. bronchiseptica RB50 and RB54 revealed 1,668 Bvg-regulated genes (identified using SAM with a false discovery rate of <0.1%).

For our motif analysis, we took log2-ratios between the microarray intensities for the immunoprecipitated sample and input sample, respectively, for each RBP.

Pearson's correlation coefficient (r) was used to compare log2 FL/LL expression ratios between the microarray and qRT-PCR analyses of select genes.

Encouragingly, there was a high confirmation rate with the real-time PCR and consistency between the microarray and PCR detection of expression ratio differences for each of the genes analyzed, suggesting that the majority of the genes identified by the microarray are bona fide differentially expressed genes in OA bone.

Results of this analysis correlated well with the data obtained from the microarray experiments, with an overall correlation coefficient of 0.85 between the microarray fold-change values and the expression ratios from k-PCR.