The "Optional parameters setting" panel contains three more input parameters: "Overlap": a value between 0 and 1, denoting the maximum allowed fraction of common nodes between two alignments, in order to be considered distinct.
The third issue is related to the fact that the maximum allowed difference between the means, (the regulatory cutoff) is fixed, regardless of the between- or within-subject variances.
Moreover, in streaming applications, there is a need to offer strong guarantees on the maximum allowed delay between incoming data and its corresponding anonymous output.
The maximum allowed distance between reads was set to 500 bp.
As the TFIID binding site is not at the gene start, this distance is farther than the maximum allowed distance between Met4 and the polymerase.
The physical constraints that we want to define are: the ordering of the sites relative to the gene start, the orientation of the matrices, the maximum allowed distance between Met4 and the polymerase binding site, and the spacing range between Cbf1 and Met31 that can bind Met4.
Let ϵ be the maximum allowed difference between two overlapping reads.
The number of episodes and LOS differed surprisingly little whether the maximum allowed gap between successive entries was one or two calendar days.
RNALfold is a Minimum Free Energy-based predictor that returns the locally stable secondary structures of an RNA sequence according to a given parameter L that represents the maximum allowed distance between base-pairs.
The maximum allowed time span between the detection and the follow-up for a successful recovery is found using simulated GTO orbits and observations.
