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Low levels of Beta diversity (high similarity indices) were observed between the four samples at the phylum-level.
Dendrograms were then constructed from a distance matrix containing Pearson correlations calculated iteratively between the four samples and 223 genes.
If significant differences existed between the four samples, Wilcoxon rank sum test was applied in order to determine which samples have significantly different amounts.
This table shows 30 out of 49 attributes were found to be significantly different (3 nearly significantly different) between the four samples.
Regardless of whether the samples provided a correct diagnosis, however, the diagnosis hardly differed between the four samples from the same tumor (Table 4).
A series of Perl scripts was developed and applied to determine the type (substitute, insertion, deletion, synonymous or non-synonymous) and quantity (number of reads per variant) of variation between the four samples and the reference cell line and in between donor and recipient.
Similar(53)
This analysis resulted in 70 protein spots that differ significantly between the four sample groups.
Among them, 19 spots differed significantly between the two samples.
The levels of nuclear-encoded tRNAs were strongly correlated between the two samples (Supplementary Figure 1B).
(b) Venn diagram of the overlap shows high similarity in called peaks between the two samples.
Black spots indicate genes that were not differentially expressed between the two samples.
More suggestions(18)
between the four models
between the four trials
between the four sampling
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between the four species
between the four nominees
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between the four adults
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between the four helices
between the four periods
between the four subsystems
between the four pins
between the four provinces
between the four parties
between the four nations
between the four signals
between the four treatments
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com