We calculated the correlation coefficients between the expression profiles of these TFs and the differentially expressed (up- and down-regulated) genes in saliva in all samples.
We then calculated the correlation coefficients between the expression profiles of these significantly altered TFs and the differentially expressed genes (both up- and down-regulated) in the saliva of the melanoma-bearing mice.
An improved distance measure between the expression profiles linking co-expression and co-regulation in mouse.. Estimation of the loss of an estimate.
The results revealed profound differences between the expression profiles of spermatozoa that resulted in pregnancy versus those that didn't.
Aiming to infer putative functions for lineage-associated ncRNAs during differentiation, we constructed a correlation matrix between the expression profiles of the fingerprint/anti-fingerprint ncRNAs and 18,295 protein-coding genes (Fig. 2f).
Finally, hierarchical clustering of genes revealed correlations between the expression profiles of neural crest genes in individual neural crest cells, indicating genes that are most likely to be transcribed in the same cells at the same time.
The 0, 12 and 24 hrs profiles were chosen to record differences between the expression profiles of the rice homologs mapped to the same enzymatic activity.
Perfect correlations are also found between the expression profiles of the intronic miRNAs and their host genes [49].
After normalization, we calculated the Pearson's correlation between the expression profiles of the miRNAs and the mRNAs, and compared these correlations with the random case.
Overall there is quite good correlation between the expression profiles of nuclear receptor genes in human SGBS cells and mouse 3T3-L1 cells.
For microarray expression data, we calculated Pearson-Correlation Coefficients (average method) to measure the correlation between the expression profiles [7], [28] of a pair of genes.
