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These results indicate that there is a relationship between the evolutionary process and the gain in adaptability to alkaline environments.
More recently, these population-based approaches have been joined by phylogenetic analyses that attempt to make a connection between the evolutionary process and population dynamics.
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However, it is important to note here that although the congruence of such trees reflects a similarity between the evolutionary processes (co-evolution) this is not sufficient evidence to demonstrate the existence of mutual influence (co-adaptation).
Usage of codons within a gene can also be highly biased, and consequently the rate is multiplied by the equilibrium frequency of the targeted codon π j, which is assumed to remain unchanged between generations of the evolutionary process.
We are also aware that our analysis is informative only at the level of transcription, and that there are multiple steps between this window into the evolutionary process and demonstrations of sub- and neofunctionalization at the protein and metabolic levels.
The power-weight coefficients vary adaptively between 0 and 1 during the evolutionary process.
Variation in the evolutionary process between sites is typically modelled by a rates-across-sites distribution such as the gamma distribution.
The interaction between the line used for the evolutionary process and the test line describes the variance due to the differences among the 14 parasite line x mosquito line combinations (16 when the two delayed lines are included).
Also, the mutation rate of each domain for DBC1 in fish is similar to that of insects for CCAR1, indicating a similar trend during the beginning of the evolutionary process between both proteins, with CCAR1 evolving first.
In addition, the proportion of homoeologous duplicated QTLs that can be observed also depends on the divergence time between the parental species and the evolutionary process (mainly artificial or natural selection) taking place in the history of these species for the studied trait.
We performed a comparable statistical analysis on the paired BC DCIS and IDC samples to understand how the evolutionary process varies between early stages and late stages of tumor development.
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