Sentence examples for between the cDNA sequence from inspiring English sources
Alternatively spliced forms were identified by sequence alignment between the cDNA sequence and the genomic sequences.
The intron position of each rpl6 gene was determined by comparison between the cDNA sequence [accession nos.: AK119694 and CI260120] and the corresponding genomic sequence [locus tags: Os03g0725000 and Os08g0484301].
Intron/exon structure of the gene was estimated based on the comparison between the cDNA sequence and the corresponding genome sequences of Williams 82 deposited in the soybean genome database.
Sequence alignment between the cDNA sequence and genomic sequence indicated that CYFIP1 was comprised of 33 exons, and the pattern of alternative splicing and intron-exon junctions is diagramed in Fig. 2C and Additional file 2. CYFIP1 spans about 110 kb of genomic DNA.
To better understand the disagreement between the cDNA sequencing and array results, we performed qPCR on a large subset of genes.
Sequence alignment showed an almost perfect nucleotide match between the cDNA sequences and the corresponding exonic regions of the genomic sequences and evidenced the complex genomic organization of the eight cloned PDI-like genes of wheat.
This database was used to approximately locate and extract the homologous regions, and the homologous pairs between the cDNA sequences of the markers and a rice genome fragment that covers 5-kb sequence of both the flanked homologous regions obtained via BLASTN search were aligned using SIM4 [ 21] with default parameter settings.
This technique offers the advantage that it is rather insensitive to mismatches between the probe and the cDNA sequence.
The full-length cDNA was obtained by assembling the three fragments indicated above, and the cDNA sequence between AGO1-O1 and -O2 was confirmed by RT-PCR cloning and sequencing.
In this allele the T-DNA is inserted between nucleotide 723 and 724 in the cDNA sequence.
(B) Protein sequence of SFAR4 deduced from the cDNA sequence.
