Sentence examples for between the assemblies compared from inspiring English sources

Thus, the number of genes in synteny computed using the available methods is only a rough measure of the actual structural similarity between the assemblies compared.

The CRR of a particular CCDS was often much lower in the pure assemblies compared to the hybrid assembly.

Trinity exhibited the most uniformity among assemblies compared to the variation among assemblies from Velvet/Oases and SOAPdenovo-Trans.

The total numbers of bases assembled were also significantly higher (P-value < 0.05) in all isolates for the de novo assembly compared to those in the mapped assemblies, irrespective of the difference in sequence coverage between isolates.

The number of gaps between unique contigs in each of the assemblies was compared to the predictions of the algorithm.

The assemblies were compared to a reference assembly (using MUMmer), made with an exact graph.

This assembly compares well with the TIGR assembly [ 13], which generated 2,109 unigenes with 1,631 singlets.

For proper comparison between the assemblies, the results of mapped cDNA for the respective assemblies were compared with those for TIGR4.

This percentage was again highly variable between the assemblies.

This second assembly step reduces redundancy between the assemblies from each sample and extends any partial transcripts contained within individual sample assemblies.

The assemblies produced were compared to the reference sequence of Acinetobacter[ 11], and differences between the two versions were detected.