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We found an analytical sensitivity of 1 to 50 copies, depending on the degree of homology between strains from different species and the type of sample used for extracting Leptospira DNA.
We found no decisive evidence for recombination between strains from different genera.
The chromosome copy number can vary considerably between strains from different T. cruzi DTUs and even within the same DTU.
The sequenced genomes are also very diverse with typical distance between strains from different clades dS ≈ 0.5.
On the other hand, recombination between strains from different lineages or between reservoir viruses and the viruses from the dominant population were more prevalent in the asymptomatic patients.
It is likely that the number of intraspecies recombination events between strains from the same subclade is higher than that identified between strains from different subclades.
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Miyazaki and her colleagues (2003) studied the phenotypic and genotypic responses of natural strains of Saccharomyces cerevisiae to oxidative stress and found differences in gene-expression patterns between strains from the different slopes [17].
For the analysis, V. campbellii strains were divided into two groups, corresponding to two subclades identified using NeighborNet analysis, and the number of recombination events between strains from two different subclades was elucidated.
The patterns of phylogenetic divergence between FIV strains from different cat species are concordant between all viral gene regions with one notable exception, the env gene.
Overall, lion LTRs are not identical between subtypes B and E, differing by 15% in nucleotide substitutions, comparable to that observed between FIV Fca subtypes A, B and C. Deep genetic divergence between FIV strains from different cat species made alignments problematic.
Increasing mating between fungal strains from different hosts increased the likelihood of super-races persisting in the population and becoming fixed.
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