The resulting experimental fitness landscape in terms of the Hamming distance per position between nucleotide sequences is shown in Fig. 10.
Particularly, a prominent co-linearity between sheep and human sequences is shown at the 3' end of the locus, as indicated by the long contiguous line that starts from the sheep TRAV28S1 and ends to the TRAC gene.
The homology between these constructs and the original sequences is shown in Table 1.
The nucleotide positions upstream of the ATG are presented as negative numbers and the differences between the promoter sequences are shown in grey.
The cross-correlation coefficients of PCA parameters and mouth height between real and animated sequences are shown for the selected Pareto points.Evaluation space for and Evaluation space for and.
Differences in the distribution of repetitive DNA sequences were shown between Glycine species in the current study (summarized in Table 2).
Twenty alignments between assembled contigs and real sunflower DNA sequences are shown as Additional file 1. Mismatches related to transitions/transversions represent only 7.1% of 12,727 aligned nucleotides, indels amount to 0.4%.
Residue conservation between in TorD torAC and TorD fdh sequences were shown to differ considerably around C-terminal α-helix 10 based on alignments to the current X-ray crystal secondary structure (1N1C [ 61]) (Additional file 5: Figure S5).
