Therefore, changing thresholds for the minimum target length required to predict the presence of an sRNA to values between 0.6 × query length and 0.8 × query length does not affect the main conclusions of the paper.
We repeated the analysis using different values for the minimum BLAST+ target length required to predict presence in a given genome and found that changing this threshold to values between 0.6 × query length and 0.8 × query length did not significantly affect our results.
While the average times did increase as query length increased (0.43 s between query lengths of one and two terms, and 1.55 s between query lengths of two and three words), there were overlaps in the retrieval times of individual queries across the sets.
The approach uses the parameters: word frequency, query length and entity matching for distinguishing the user's query into exploratory, targeted and analysis search.
In addition, length of alignment must be longer than half of the query length and target length, and the difference of the query and target length must be shorter than 25% of the shorter one.
The first two of these fields show query length and number of mined SPs.
We compare interactions occurring between users and Web search engines from the perspectives of session length, query length, query complexity, and content viewed among the Web search engines.
Because the query data are used and not updated, the query string, Q s, query length, Q l, and query frequency vector, Q v, are stored in the constant memory.
A further analysis based on query length, speaking speed, and energy is presented next.
Genes were considered common to two taxa in pair-wise comparisons if reciprocal BLAST hits had (a) an e-value ≤ 1*10-5 1*10-5 90% nucleotide identity and (c) a difference between query and alignment length of ≤ 20 bp.
