Sentence examples for between microarray probes and from inspiring English sources

Similarity between microarray probes and probed DNA was estimated via probes of alleles of marker genes gyrB, mutS, and recA spotted on the microarray.

The corresponding relationships between microarray probes and legume bZIP genes were built using BLAST (best hit under 1e-10).

We used the BLAST software package [ 31] to determine the identity between microarray probes and predicted target sequences.

BLAST alignments were used to extrapolate the number of mismatches (MM) between microarray probes designed to axolotl and orthologous EST contigs from tiger salamander, and vice versa.

Two types of technical issues influence the interpretation of our results; the first issue concerns the complexity of the tissues analyzed and the second issue concerns the effect of possible incompatibilities between microarray probe sequences and the transcripts under investigation.

A comparison between microarray probe intensities and qPCR fold changes indicated that different miRNAs had different levels of correlation, varying from R2 = 0.81 to R2 = 0.95.

In general, the direction of change in expression was concordant between qPCR and the microarray probes and a positive Pearson correlation was obtained between qPCR and probe_1 (r2 = 0.895, p < 0.0001 n = 40) and between qPCR and probe_2 (r2 = 0.901, p < 0.0001 n = 40) (Table 9).

There is also strong correspondence between microarray probe set signals and qRT-PCR signals [ 7- 9].

This may be explained by the inability of our microarray probes and PCR primers to discriminate between IRE-positive and IRE negative transcripts.

NM wrote the software used for probe design, designed microarray probes and performed microarray hybridizations.

Mismatches between a microarray probe and its target sequence affect hybridization that cause erroneous probe signal estimates [28].