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We calculated for each robust or fragile TF the pair-wise Pearson correlation coefficients between its expression profile and those of its binding target genes, and also between its expression profile and those of its cooperative TFs.
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To question the correlation between PARK2 and adiposity in another animal model, we compared its expression profile between the two same mice models used for JAG2 study.
The canine transmembrane BAX inhibitor motif containing 4 (TMBIM4 or CGI-119) [ 22] was chosen as reference gene for the absence of statistically significant differences in its expression profile between the healthy and pathologic samples.
Finally we investigated evidence for a correlation between TRAIL and its receptor expression profile and the severity of disease in RA patients.
To adapt to these environmental differences, A. oryzae would change its gene expression profile between LC and SC.
Next, Pearson's correlation coefficients between the expression profile of each gene coding for a node and each gene coding for its interaction partners were calculated.
To determine whether there is an association between gene expression profile and looping extravascular matrix patterns in primary uveal melanomas.
For some clones there was coherence between the expression profile and copy number.
The results showed agreement between the microarray expression profile and quantitative RT-PCR data (Fig. 6F).
Several works have established the interconnection between expression profile similarity and protein interactions [ 3, 4].
Comparisons between expression profile changes in young 3xTg-AD mice versus 3 m.o.o
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