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The host/pathogen interaction between isolates sampled from four Mo populations collected across the rice-producing regions of China was tested using two established panels of differential cultivars.
We first considered the distribution of pairwise genetic distances between isolates sampled from a single host.
Principal component analysis using the 107,221 SNPs with no missing data in the complete dataset of 85 isolates did not show any separation between isolates sampled from the Kintampo and Navrongo populations (Additional file 2: Figure S2).
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The prevalence of antibiotic resistance usually varies between isolates from the different sampled stations and even between isolates from different herds on the same farm [ 16].
For example, different ERIC-PCR profiles between isolates from the same sample were obtained, including PCP-a vs. PCP-b, PAG-a vs. PAG-b, BVM-a vs. BVM-b, and MFA-b vs. MFA-c, and between strains isolated from different samples, including PCP (a or b) vs. PAG (a or b) and BVM (a or b) vs. MFA (b or c).
Genetic similarity between isolates from DRC and the sample obtained from the 2005 Sudan MPXV outbreak support the second hypothesis, importation of the virus.
Nonrandom organization of var DBLα types between 30 sampled parasite isolates from Amele, Papua New Guinea as published in (Chen et al., 2011 ).
Multilocus sequence typing determined a genetic match between strains isolated from samples from a case-patient and from the air flow sensor in the ventilator.
We did not identify differences in the sensitivity to favipiravir between samples isolated from treated and untreated animals, suggesting no adaptation to the treatment.
Before tackling the task of isolating DNA samples from their hair one recent morning, the teachers listened to David A. Micklos.
Genotyping using these well-known virulence marker genes is considered as one of the best approaches for study of correlations between H. pylori isolates from different samples [ 16, 17].
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