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Exact(5)
Nevertheless, snpTree can differentiate between isolates from humans and pigs which is very meaningful to epidemiological studies.
Phylogenetic analysis based on RVFV partial small and medium RNA sequences showed a low level of variation between isolates from humans, animals, and mosquitoes.
In cases of acute hepatitis E contracted by consumption of infected meat, 100% homology between isolates from humans and infected animals was observed, which indicates that during ingestion, all quasispecies are transmitted.
To assess the clinical significance of M. lentiflavum isolates reported to the Queensland Tuberculosis Control Centre, Australia, during 2001 2008, we explored the genotypic similarity and geographic relationship between isolates from humans and potable water in the Brisbane metropolitan area.
Even within that high degree of similarity among isolates during the 2012 fair season, influenza A(H3N2v) isolates from humans differed from their fair-matched influenza A(H3N2pM) isolates from swine by no more than 16 nt (range 0 16) at 6 of the 7 fairs; the exception was Fair E, for which the closest match between isolates from humans and swine was 34 nt.
Similar(55)
The applied method has to allow for some genetic diversity between isolates from human and food sources, but only to the degree that it can still be assumed that they originate from the same source 17.
Two other research groups recently used MLST to show genetic differences between C. albicans isolates from humans and animals (3, 4 ).
Studies have shown a genetic relatedness between M. avium isolates from humans and pigs, adding to speculations that pigs may be a vehicle for NTM infection in humans [ 9, 13, 15, 16].
Strong sequence similarity (>96%) was observed between HEV isolates from human cases in northern and southern France and the strain isolated from swine in Belgium (5 ), classified as subgenotype 4b.
Generally, invasion in the human intestinal epithelial cell line T84 was comparable between the cat isolates and isolates from humans.
Nucleotide identities of 99.74% and 99.87% were detected between the matched subtype H3N2 isolates from humans and swine at Fairs E and F, respectively.
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