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As shown in table 3, significant difference of dN/ dS ratios is found between genes from different groups but not found between genes from the same groups.
In both cases it would be possible for the mechanism that controls mtDNA inheritance to remain unaffected when the mechanism for sex determination is disrupted by incompatibilities between genes from different species or by developmental anomalies caused by triploidization.
Eleven sequence exchanges were detected between genes from different clades.
The time-evolving networks also provide an overview of the interactions between genes from different functional groups.
Subsequent speciation can lead to paralogous relationships between genes from different genomes (referred to as out-paralogues) [ 67].
Orthology between genes from different species is indicated by the matching of gene trees and species tree.
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Sequence differences can also occur between homologous genes from different strains of a certain bacterial species.
Moreover, a differentiation between homeologous genes from different genomes is not always possible.
Thus, comparisons between expressed genes from different tissues allow us to discover specific sets of genes responsible for rhizome development and growth.
As the shortest distance between two genes from different che operons in R. sphaeroides is ~100,000 base pairs, adjacent genes are separated into two operons if their distance is greater than 100,000 base pairs.
Dof domains of previously identified Dof genes from O. sativa japonica and Hordeum vulgare, described by Moreno-Risueno et al. [ 18], were downloaded from Genbank and were compared to the deduced amino acid sequences of the 22 wheat genes to establish relationships between the genes from different species.
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