Sentence examples for between five haplotypes of from inspiring English sources
In this work, we present a detailed analysis of deletions, insertions, InDels, and genomic rearrangements by comparative genomics that distinguishes between five haplotypes of M. ulcerans, for which high-resolution genomic fingerprinting is still lacking.
Allele specific expression (ASE), seen as a signal of regulatory difference between two haplotypes of an individual, can in theory be driven either by genetic regulatory variation or epigenetic (in activation of one of the two alleles, for example, by DNA methylation.
Window size was varied from 0 to 100 and a parameter specifying the degree of similarity required between two haplotypes for imputation to be accepted was also added to the original algorithm.
The program calculates the maximum number of mutational steps constituting a parsimonious connection between two haplotypes with the probability of 95%, and then joins haplotypes into networks following algorithms in Templeton et al. [13].
The TCS program calculates the maximum number of mutational steps constituting a parsimonious connection between two haplotypes with the probability of 95%.
At last the output fragments are processed to plant reading errors with probability e s and empty values with probability p. In our experiments, the parameters are as follows: fragment coverage rate c=10, the difference rate between two haplotypes d=20%, the minimal length of fragment lMin=3, the maximal length of fragment lMax=7 and empty values probability p=2%.
The program calculates the frequencies of each haplotype and the number of mutational steps between two haplotypes associated with the 95% limit for the probability of parsimony ('parsimony' criterion [ 84]).
No branch collapse artifact due to ascertainment was evident on the tree; the tree pathways between the nine haplotypes of the discovery panel of isolates all contained secondary branches (Figure 1, blue haplotype labels).
The high level of divergence between the two haplotypes of N2 and CB4856 in these regions indicates an ancient origin.
Modern high-throughput genotyping technologies are unable to distinguish between the two haplotypes of a diploid organism.
