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Walker also cautions against overemphasizing the differences, and points to significant overlap between different lists of virtues ([ 15]: 35).
Often it is useful to see the overlap between different lists, enabling researchers to quickly observe similarities and differences between the data sets they are analyzing.
Words from a given list were displayed sequentially with no break provided between different lists.
Significance of the overlap between different lists of HGNC gene symbols was calculated using a hypergeometric test.
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These 154 proteins represent 89 distinct proteins due to overlap between the different lists and also due to the fact that a number of proteins, such as ALDH2, ANXA1, HSPA8, HSP90B, TCP1, VCP, RPSA, SERPINB1A, UBEK2, were identified more than once on the 2D gels which could be indicative of posttranslational modifications.
No lesion-induced deficit was apparent for recency discriminations between objects from different lists, despite using three different levels of task difficulty.
As a result, different people produced different lists, between which there appeared to be no objective means to reach agreement.
There is substantial overlap between the terms from the different lists, as shown in Additional file 1: Figure S1.
The statistical significance of the observed overlap between different gene lists obtained in different genome-wide RNAi screens was calculated using cumulative hypergeometric probability [ 35].
The statistical significance of comparisons between different gene lists was examined with the nonparametric Wilcoxon rank sum test, using R. Bonferroni-corrected [ 23] p-values < 0.05 were considered significantly different.
To test whether the same genes show elevated divergence rates between different species, lists of pair-wise significant genes were compared using Venn diagrams using the BioVenn tool [ 71].
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