Sentence examples for between coding sequences and from inspiring English sources
The prevalence of different poly(A) signals between coding sequences and a 3′-untranslated region implies potentially different polyadenylation mechanisms.
A classical problem in molecular genetics and evolution is the characterization of the complex relationships that exist between coding sequences and repetitive elements.
It is also plausible that the large 5'UTR introns function as spacers within the genome, providing an AT-rich stretch of sequence between coding sequence and promoter.
Distances between orthologous coding sequences, and between paralogous sequences were computed from synonymous (Ks) and nonsynonymous sites (Ka) by the Nei-Gojobori method [ 33].
Correlations between codon pair scores between human coding sequences and those of A. thaliana, C. elegans and E. coli are shown in Figure 1 figure supplement 4. DOI: http://dx.doi.org/10.7554/eLife.04531.004 10.7554/eLiFigure31 figuregure 1—figure supplement 1. Distribution of relative synonymous codon usage values for degenerate codons in the human genome (stop codons were excluded).
Sometimes the difference between coding sequences of parental genes and RT copies is not large enough to distinguish the RT copy from the parent.
Variation between coding sequences of P. argentatum and H. annuus, G. abyssinica or L. sativa was analyzed by comparing each individual gene (Additional file 1) as well as the overall sequences.
Distant homologies between hypothetical coding sequences and entries at the PDB, COG, PFAM and SCOP databases were detected using the FFAS03 server [ 71].
The present study has developed an approach to identifying and illustrating similarities and differences between coding sequences related to the physical position rice of putative orthologous gene models.
This link adds a new important correlation to those that hold between coding sequences, on the one hand, and their extended noncoding sequences, as well as protein structure, hydropathy, and thermodynamic stability on the other and that constitute the genomic code (Bernardi 1990, 2004).
These analyses have demonstrated that there is evidence for a link between coding sequence TNRs and regulatory function, and that this link is not unique to humans, but can also be seen to different degrees in other species.
