Sentence examples for between clusters was used from inspiring English sources
Pearson Correlation, based on average distance between clusters, was used to generate hierarchical trees based on the normalized intensity signals of the 41,000 probes on each array.
The average distance between all pairs of objects in the two different clusters was used as the measure of distance between the two clusters, and was measured using Un-weighted Pair-Group Method using arithmetic Averages.
When creating the agglomerative dendrogram the average distance between each cluster was used.
The coefficients of type-I and type-II functional divergence (θI and θII) between any two UCP clusters were used to estimate the level of functional divergence among UCP paralogues (UCP1, UCP2, UCP3 and UCP3L).
Briefly, MSM first involves clustering all conformations (a total number of 100 clusters were used) in metastable states and building the transition matrix between them.
The acceleration feature was extracted by analyzing the displacement change of four sides of this rectangle between adjacent frames, and hierarchical clustering was used to calculate its threshold.
SNPs were clustered using single linkage clustering (where the shortest distance between any two leaves of a cluster is used as the cluster difference).
When clustering is used, relationships between the classes and cellular processes may only be inferred from secondary data such as functional annotations.
In addition, although we used a larger value for the coefficient of variation between clusters than was used in the Mwanza trial, the value used (0.35) was in fact considerably smaller than the actual value of 1.02.
The distance used here was based on Kendal's tau (distance = 1-tau /22) 1-tau /2distande betheen clusters was computedistanceWard's method.
Two predominant profile clusters were identified and, for each array probe, differential expression between clusters was assessed using a moderated t-statistic (Bioconductor limma) with P-values corrected for the effects of multiple hypothesis testing over all probes using the false discovery rate (FDR) correction of Storey and Tibshirani (Storey and Tibshirani, 2003) (Bioconductor qvalue).
