Sentence examples for between cell types using from inspiring English sources

Additionally we chose a panel of six genes expected from the literature to be preferentially expressed in one cell type or the other in brain tissue, and investigated whether these were found differentially expressed between cell types using our methods.

We conducted pathway analysis based on DEGs between cell types using two different tools, GAGE 46 and SPIA.

Given the links between chromatin and transcription factor motifs is likely to differ between cell types, using such population-based approaches to identify pioneer factors for each cell type can be expensive.

The total number of summed up pixels per cell and the number of "spots" were tested for statistical significance between cell types using a Wilcoxon rank sum test with continuity correction.

The magnitudes of the differences in methylation between PM and MN cell types (Table S2) were much smaller than the differences in methylation between smokers and nonsmokers in both the MoBa and NEST study populations (Table 3) and were not statistically significantly different between cell types (using p < 0.0019 after Bonferroni correction for 26 tests) for the 5 replicated CpGs.

The percentage of traced cells was comparable between both cell types using both Cre lines.

This report presents the first study of prostate tumor tissue that examines patterns of differential expression between specific cell types using laser capture microdissection (LCM).

For further downstream analysis, we selected the top 2,000 most robust cell type specific H3K4me1 sites (Additional file 2: Table S4, Table S5) ranked by fold-change of ChIP-seq tags between two cell types using findPeaks software from HOMER (http://homer.salk.edu/homer/) (see Methods) [ 20].

If we choose to focus on the very obvious physiological (or dynamical) differences between jcBNST neurons, we can identify three main cell types using the DC step method and only two cell types using the synaptic stimulation via dynamic clamp.

The cell types used comprised parallel plate with forced flow, the same design packed with Netlon® and glass beads respectively between the parallel plates, a cell using mesh electrodes and lastly a packed bed type reactor.

As expected, we observed a good correlation between the two replicas for each cell type using the Pearson correlation (mean = 0.97).