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This discrepancy between both data sets is discussed and interpreted in terms of fundamental limitations of aerosol remote sounding in the UV Vis range.
Average Absolute Deviations, AADs%, between both data sets are less than 2% which is well within the uncertainty reported by the manufacturer for viscosity measurements, i.e., 5%.
The larger slice thickness for PET is a consequence of the inferior spatial resolution of this method and does affect, to some extent, the accuracy of spatial correspondence between both data sets.
However, our previous analysis (in which gene lists derived from the MM array were enriched in the MD data set) suggests that these comparisons did not reflect the full extent of the similarities between both data sets.
The sample sizes used in the ShB-IR cell (n = 9) vs. control cell (n = 10) experiment (exp1) allowed for direct (non-normalized) comparison between both data sets, as it was assumed that the approximate shunt path associated with the ShB-IR expressing oocytes and control oocytes was approximately equal across the populations (Fig. 3).
A comparison with these independently obtained haltere Ubx and Hth binding data, described in Methods, is shown in Supplementary Figure S1, along with tables of high confidence target genes that are shared between both data sets (Supplementary Tables S1 and S2).
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Such a table can provide complete statistical characterization within and between events of both data sets.
This pedigree was used to generate training and validation data sets with a specified maximum additive-genetic relationship between bulls in both data sets and to estimate breeding values with the standard BLUP-methodology.
The wide transcriptional response in the heat-sensitive genotype (FR) also becomes clear with the difference between the numbers in both data sets.
This intersect between genes predicted by both data sets was highly statistically significant (P < 7.422e-66, calculated based on an hypergeometric distribution analysis [ 31]).
Of these, 1495 genes are detectably expressed in our lines, and 1079 (72.2%) are classified as DE between the species in both data sets (a highly significant enrichment; χ p < 10−16).
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