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Differences between all datasets, except PSEUDO and LNCRNA in Figure 3D, were statistically supported (Kolmogorov-Smirnov test; P value <0.05; Additional file 1: Table S1), where the P values suggested that CDSP differs the most.
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Both ML and BI strategies were used to analyze all datasets (except for ITS dataset II) by using RaxML 855 and MrBayes v3.2.356, respectively.
In all datasets, except Mushroom, which are complete, some values, which are randomly removed, are treated as missing values.
GLCM is among the worst performing descriptors for all datasets, except for the Mondial Marmi dataset.
For amSVDD, its training time is usually less than others in all datasets, except a9a.
The results show that pmSVDD achieves higher accuracies on all datasets, except mushroom, in comparison to mSVDD.
For all datasets except c-Fos, sub-datasets consisting of high peaks have better scores than sub-datasets of low peaks.
All analyses identified tree-1 as the best tree, but alternative topologies could not be statistically rejected by all datasets, except in the case of tree-4.
These steps were performed for all datasets, except for TCGA and MDA datasets.
PEAKS was tested for all datasets except for HCD2 and HCD3 datasets.
All other analyses were performed including all datasets except as indicated.
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